Thread: C programing for DNA...

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    C programing for DNA...

    hi guys... im new here... Im studying in a university and taking C programing subject this semester... an assignment given to us without guidelines... as we are new to c programing, we need ur help to complete our assignment...

    The questions are...

    1. By using the C language on the Microsoft Visual Studio C++, create a human-size chromosome with 125 Mb by using a pseudorandom number generator (PRNG) function to generate integers of 0, 1, 2, 3 to represent the DNA bases ATGC. Specify estimated time duration for this computing execution.


    2. Store the information of each DNA base in RAM in 2 bits each like 16 DNA bases for a 32-bit integer, or 32 DNA bases for a 64-bit integer.


    3. Store the generated human-size chromosome in an electronic file in the hard disk drive (HDD) in binary form. Specify estimated time duration for this computing execution.


    4. Read the first 0.1% of the generated binary file in Step [T.3], convert the 002, 012, 102, and 112 to the corresponding A, T, G, and C, or any order, and print out the chromosome in ATGC character format in a text file (.TXT). Specify estimated time duration for this computing execution.


    please help us to complete our assignment... thanks in advance to brothers and sisters... TQ...
    Last edited by S16; 04-29-2009 at 12:43 AM.

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