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Type: Posts; User: jodders

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  1. Replies
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    LaTEX help....need LaTex guru advice

    hi,m trying to make my front page really cool..

    Its on DNA.......and basically,i want my letters to have a "double helix" around a letter...

    i was told this was possible


    kind regards
    ...
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    hey guys,thanks for some tips.. the data looks...

    hey guys,thanks for some tips..

    the data looks like:
    [code]
    AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAA
    AGAGTGTCTGATAGCAGC...
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    Optimizing my program

    Hi, my program works fine but its not very efficient. It struggles with large files. I was pretty proud of myself that i managed to code it well,but is there anyway of making it better?

    this could...
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    finding mismatches

    hi gang, having problems with a program i am trying to write..

    im going to try my best to explain this. I am terrible at explaining when i am nervous. ops:

    In some programs i have written, i...
  5. Thread: Suffix Trees

    by jodders
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    Suffix Trees

    hi,im looking at implementing a suffix tree and i dont know where to begin, or find examples in c++. Just looking for people who know more about these damn trees..

    kind regards

    JoHn
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    reading from a text file a certain amount

    hi,

    i was wondering, if you were reading information from a text file,could you control the amount read in?

    For example, if you had 3MB of data (just sequences of letters) in a text file, could...
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    hashing

    delete
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    string data(readFile()); got it...

    string data(readFile());


    got it working..thanks pianorain :)
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    reading from a text file help......

    hi ppl,

    i am having trouble linking my text file into a program that im writing.

    I started with a basic string to test the outcome of the program which works fine. So,im now testing the program...
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    hi hk_mp5kpdw, ihave managed to output the...

    hi hk_mp5kpdw, ihave managed to output the results largest first which i wanted to do.

    To improve this program,I have decided to add some human input to the program. Its a little tricky though to...
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    hi hk_mp5kpdw, you have been most kind. I...

    hi hk_mp5kpdw, you have been most kind. I apologise for taking your time.I have found your comments and help so helpful. I will have a good look at what you have told me and will get back to you if i...
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    thanks hk_mp5kpdw for your reply,pm;y two errors...

    thanks hk_mp5kpdw for your reply,pm;y two errors now!





    int main()
    {
    int variable;
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    hi guys,i am very very appreciative with the help...

    hi guys,i am very very appreciative with the help you have given me.Iam still learning c++ by myself and have found your tips useful. I have found "hk_mp5kpdw " tips outstanding and also pianorain. ...
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    so how would you loop to the end of the string,...

    so how would you loop to the end of the string, instead of looping 4 characters.

    everytime i try and compile, i get set undeclared, and strSet undeclared
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    hi,thanks for the help and time to write that...

    hi,thanks for the help and time to write that sample code.but i have already done a program similar to that, basically calculating the number of occurences from the string..

    how i would find a...
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    i have already done a program which does...

    i have already done a program which does substrings of 1,but this program would be "n" substring.

    In this case though ACGTCATGAGCTA , the maximal repeat is A. As there are no other repeats.
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    thank you for the quick reply, sorry for the...

    thank you for the quick reply,

    sorry for the lack of information, a letter is allowed to repeat itself. Im looking for the maximal repeat in a sequence.There are only 4 letters in the sequence....
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    repeats in a string

    I need help on how i am going to implement this.

    i have a sequence of letters such as ATGCATA

    and i want to find the biggest number of repeats which in this case woud be :AT

    help would be...
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