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Hi everyone,
I'm having trouble with this Valgrind to profile a program I built. I get the following error:
==6403==
valgrind: vg_libpthread.c:2331 (open64): Assertion `open64_ptr != ((void *)0) && open64_ptr != open64' failed.
==6403== Please report this bug at: valgrind.kde.org
I am running linux 64bits and valgrind-2.2.0. Anyone know how to fix this or what might be the problem?
Thanks,
Ed.
Looks like you need a later version of Valgrind.
http://osdir.com/ml/debugging.valgri.../msg00118.html
http://osdir.com/ml/debugging.valgri.../msg00042.html
2.2.0 is really old. I have 3.3.1.
[edit] I should probably mention that you likely won't have to get the source from CVS by now. Just download 3.3.0 or 3.3.1 or something and everything should be all right.
If you're using Linux, you might want to use a package manager to upgrade the version on your system. [/edit]
Hi dwks,
Thank you for your reply. I'm trying to install the latest version, by following the instructions in the README file.
I configured first
but when I try to make, I get this error:Code:./configure --prefix=/usr/local/bin
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether ln -s works... yes
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
checking for ranlib... ranlib
checking for perl... /usr/bin/perl
checking for gdb... /usr/bin/gdb
checking for a supported version of gcc... ok (gcc (GCC) 3.4.4 20050721 (Red Hat 3.4.4-2))
checking build system type... x86_64-unknown-linux
checking host system type... x86_64-unknown-linux
checking for a supported CPU... ok (x86_64)
checking for use as an inner Valgrind... no
checking for a 64-bit only build... no
checking for a 32-bit only build... no
checking for a supported OS... ok (linux)
checking for the kernel version... 2.6 family (2.6.9-22.ELsmp)
checking for 32 bit build support... yes
checking for a supported CPU/OS combination... ok (x86_64-linux)
checking for egrep... grep -E
checking the libc version... 2.3 family
checking for X... libraries /usr/X11R6/lib64, headers /usr/X11R6/include
checking if gcc accepts -m32... yes
checking if gcc accepts -maix32... no
checking if gcc accepts -m64... yes
checking if gcc accepts -maix64... no
checking if gcc accepts -mmmx... yes
checking if gcc accepts -msse... yes
checking if gcc accepts -mpreferred-stack-boundary... no
checking if gcc accepts -Wno-pointer-sign ... no
checking if gcc accepts -Wdeclaration-after-statement ... yes
checking if gcc accepts -fno-stack-protector ... no
checking if gcc supports __builtin_expect... yes
checking if ppc32/64 as supports mtocrf/mfocrf... no
checking if x86/amd64 assembler speaks SSE3... yes
checking for TLS support... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking sys/endian.h usability... no
checking sys/endian.h presence... no
checking for sys/endian.h... no
checking endian.h usability... yes
checking endian.h presence... yes
checking for endian.h... yes
checking mqueue.h usability... yes
checking mqueue.h presence... yes
checking for mqueue.h... yes
checking for uid_t in sys/types.h... yes
checking for off_t... yes
checking for size_t... yes
checking whether time.h and sys/time.h may both be included... yes
checking for working memcmp... yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for getpagesize... yes
checking for working mmap... yes
checking return type of signal handlers... void
checking for floor... no
checking for memchr... yes
checking for memset... yes
checking for mkdir... yes
checking for strchr... yes
checking for strdup... yes
checking for strpbrk... yes
checking for strrchr... yes
checking for strstr... yes
checking for semtimedop... yes
checking primary target for usable MPI2-compliant C compiler and mpi.h... yes, m picc
checking secondary target for usable MPI2-compliant C compiler and mpi.h... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating valgrind.spec
config.status: creating valgrind.pc
config.status: creating docs/Makefile
config.status: creating docs/lib/Makefile
config.status: creating docs/images/Makefile
config.status: creating docs/internals/Makefile
config.status: creating docs/xml/Makefile
config.status: creating tests/Makefile
config.status: creating tests/vg_regtest
config.status: creating perf/Makefile
config.status: creating perf/vg_perf
config.status: creating include/Makefile
config.status: creating include/vki/Makefile
config.status: creating auxprogs/Makefile
config.status: creating coregrind/Makefile
config.status: creating memcheck/Makefile
config.status: creating memcheck/tests/Makefile
config.status: creating memcheck/tests/amd64/Makefile
config.status: creating memcheck/tests/ppc32/Makefile
config.status: creating memcheck/tests/ppc64/Makefile
config.status: creating memcheck/tests/x86/Makefile
config.status: creating memcheck/docs/Makefile
config.status: creating cachegrind/Makefile
config.status: creating cachegrind/tests/Makefile
config.status: creating cachegrind/tests/amd64/Makefile
config.status: creating cachegrind/tests/ppc32/Makefile
config.status: creating cachegrind/tests/ppc64/Makefile
config.status: creating cachegrind/tests/x86/Makefile
config.status: creating cachegrind/docs/Makefile
config.status: creating cachegrind/cg_annotate
config.status: creating callgrind/Makefile
config.status: creating callgrind/callgrind_annotate
config.status: creating callgrind/callgrind_control
config.status: creating callgrind/tests/Makefile
config.status: creating callgrind/docs/Makefile
config.status: creating helgrind/Makefile
config.status: creating helgrind/tests/Makefile
config.status: creating helgrind/docs/Makefile
config.status: creating massif/Makefile
config.status: creating massif/tests/Makefile
config.status: creating massif/perf/Makefile
config.status: creating massif/docs/Makefile
config.status: creating massif/ms_print
config.status: creating lackey/Makefile
config.status: creating lackey/tests/Makefile
config.status: creating lackey/docs/Makefile
config.status: creating none/Makefile
config.status: creating none/tests/Makefile
config.status: creating none/tests/amd64/Makefile
config.status: creating none/tests/ppc32/Makefile
config.status: creating none/tests/ppc64/Makefile
config.status: creating none/tests/x86/Makefile
config.status: creating none/docs/Makefile
config.status: creating exp-omega/Makefile
config.status: creating exp-omega/tests/Makefile
config.status: creating exp-omega/docs/Makefile
config.status: creating exp-drd/Makefile
config.status: creating exp-drd/docs/Makefile
config.status: creating exp-drd/tests/Makefile
config.status: creating config.h
config.status: executing depfiles commands
Primary build target: AMD64_LINUX
Secondary build target: X86_LINUX
Default supp files: xfree-3.supp xfree-4.supp glibc-2.34567-NPTL-helgrind.supp glibc-2.3.supp
Do I need to install something else before I install valgrind-3.3.1 ?Code:make
make all-recursive
make[1]: Entering directory `/home/ed/valgrind-3.3.1'
Making all in include
make[2]: Entering directory `/home/ed/valgrind-3.3.1/include'
Making all in vki
make[3]: Entering directory `/home/ed/valgrind-3.3.1/include/vki'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/ed/valgrind-3.3.1/include/vki'
make[3]: Entering directory `/home/ed/valgrind-3.3.1/include'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/home/ed/valgrind-3.3.1/include'
make[2]: Leaving directory `/home/ed/valgrind-3.3.1/include'
Making all in coregrind
make[2]: Entering directory `/home/ed/valgrind-3.3.1/coregrind'
make all-am
make[3]: Entering directory `/home/ed/valgrind-3.3.1/coregrind'
make -C ../VEX CC="gcc" AR="ar" pub/libvex_guest_offsets.h
make[4]: Entering directory `/home/ed/valgrind-3.3.1/VEX'
make[4]: `pub/libvex_guest_offsets.h' is up to date.
make[4]: Leaving directory `/home/ed/valgrind-3.3.1/VEX'
for f in vgpreload_core-x86-linux.so vgpreload_core-amd64-linux.so ; do \
p=`echo $f | sed -e 's/^[^-]*-//' -e 's/\..*$//'`; \
n=`echo $f | sed -e 's/-[^-]\{1,\}-[^-.]\{1,\}//'`; \
mkdir -p ../.in_place/$p; \
rm -f ../.in_place/$p/$n; \
ln -f -s ../../coregrind/$f ../.in_place/$p/$n; \
done
make[3]: Leaving directory `/home/ed/valgrind-3.3.1/coregrind'
make[2]: Leaving directory `/home/ed/valgrind-3.3.1/coregrind'
Making all in .
make[2]: Entering directory `/home/ed/valgrind-3.3.1'
mkdir -p ./.in_place
rm -f ./.in_place/default.supp ./.in_place/glibc-2.2.supp ./.in_place/glibc-2.3.supp ./.in_place/glibc-2.4.supp ./.in_place/glibc-2.5.supp ./.in_place/glibc-2.6.supp ./.in_place/glibc-2.7.supp ./.in_place/glibc-2.8.supp ./.in_place/aix5libc.supp ./.in_place/xfree-3.supp ./.in_place/xfree-4.supp ./.in_place/glibc-2.34567-NPTL-helgrind.supp ./.in_place/glibc-2.2-LinuxThreads-helgrind.supp ./.in_place/glibc-2.X-drd.supp
ln -s ../default.supp ./.in_place
ln -s .././glibc-2.2.supp .././glibc-2.3.supp .././glibc-2.4.supp .././glibc-2.5.supp .././glibc-2.6.supp .././glibc-2.7.supp .././glibc-2.8.supp .././aix5libc.supp .././xfree-3.supp .././xfree-4.supp .././glibc-2.34567-NPTL-helgrind.supp .././glibc-2.2-LinuxThreads-helgrind.supp .././glibc-2.X-drd.supp ./.in_place
make[2]: Leaving directory `/home/ed/valgrind-3.3.1'
Making all in tests
make[2]: Entering directory `/home/ed/valgrind-3.3.1/tests'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/ed/valgrind-3.3.1/tests'
Making all in perf
make[2]: Entering directory `/home/ed/valgrind-3.3.1/perf'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/ed/valgrind-3.3.1/perf'
Making all in auxprogs
make[2]: Entering directory `/home/ed/valgrind-3.3.1/auxprogs'
mpicc -g -O -fno-omit-frame-pointer -Wall -fpic -shared -m64 \
-I../include \
-o libmpiwrap-AMD64_LINUX.so libmpiwrap.c
/usr/bin/ld: /usr/lib64/libmpi.a(laminit.o): relocation R_X86_64_32S against `lam_mpi_comm_world' can not be used when making a shared object; recompile with -fPIC
/usr/lib64/libmpi.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
mpicc: No such file or directory
make[2]: *** [libmpiwrap-AMD64_LINUX.so] Error 1
make[2]: Leaving directory `/home/ed/valgrind-3.3.1/auxprogs'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/ed/valgrind-3.3.1'
make: *** [all] Error 2
What Linux distro are you using? Looks like Fedora. I can't believe that it doesn't provide a valgrind package. That would be a lot easier than compiling your own.
For example, here's one for valgrind 3.2.1.
http://www.icewalkers.com/rpm/valgri...rind-3388.html
As for the error, that is due to trying to link against the static libmpi. I don't know why mpicc would do that - either you don't have a dynamic version installed, or perhaps it stupidly tries to link against the static library directly.
Thank you for your help.
A friend here helped me install it with.
yum search valgrind,
and then yum install.