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I wish I could get my netbeans 6 to work well when compiling with g++, but even when the system variables are set to cygwin/bin, and selected on the options in netbeans, still does not work.
You may find it easier to use the MinGW port of g++ with Netbeans instead of Cygwin. I relied on the article
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Yes, they do have a very good tutorial. Is just that for an unknown reason, the settings don't stay in place. Once the suite is open, the settings changed back to nothing. It could be something on the Windows environment.
I have not had this problem. In fact, my first change was to change the default .cc extension for C++ source files to .cpp, and this has not mysteriously changed back between projects.